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Ordering Cell Characterization

Quick Guide:
First Steps to Testing

Please follow the detailed ordering instructions below. If you need more support, please contact us.

Select a Testing Protocol

Choose from our list of standard testing protocols or request a custom testing option.

Are you looking for a custom protocol?

Contact Us

Complete Submission Documents

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Prepare Samples, Package & Ship

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Ready to Get Started

We are looking forward to supporting you. Please click on “Get Quote” to get started.

Detailed Ordering Instructions

When you begin planning your testing, please contact us at agl@appliedgenetics.com to discuss the basic requirements of your sample and confirm that AGL can accommodate your cells. At minimum we’ll need to know the following about your sample:

  • Species
  • Cell type
  • Growth conditions (temperature, % CO2, stationary vs shaker)
  • Estimated submission date

As you near your submission date, please fill out one Study Initiation Form and one signed Protocol per cell line to be analyzed. Each cell line submitted will be treated as a single study and will receive an individual final report. On the submission documents please be sure to list the cell line ID exactly as you would like it to appear in the final report. All submission documents must be completed before AGL can proceed with your testing. We recommend emailing the documents to us at agl@appliedgenetics.com prior to shipping your cells so that we can confirm adequate completion and avoid delays in processing your sample.

AGL needs actively dividing cells in order to obtain a successful chromosome harvest from your sample. Ideally, cultures will have been prepped so that they are likely to be in log phase approximately 24-48 hours after arrival at our lab (or after thawing, if submitted frozen). We request that you set up multiple flasks seeded at different densities so that we have a few options to select from when attempting chromosome harvest and to serve as backups in case of damage to any of the flasks during transport. If sending cryopreserved cells please provide at least two vials, each containing a minimum of 1e6 viable cells.

All samples received by AGL are handled under BSL-2 conditions. We are unable to accept cell samples requiring higher biosafety level conditions. Please inform us of any biological risks associated with your sample prior to submission.

Actively dividing cultures should be shipped at room temperature, surrounded with room-temperature gel packs (or similar) to stabilize temperature during transport. We recommend placing each vessel inside of a separate plastic zip-closure bag lined with paper towels prior to wrapping it securely with bubble wrap. Flasks of live cells should be filled with medium up to the bottom of the neck of the flask (see example) so that the cells remain covered during transport but the flasks are not so full that they are prone to leaking. AGL will reduce the volume of media to the amount appropriate for culture after unpacking the sample and allowing time for any cells in suspension to settle.

Cryopreserved cells must be shipped on dry ice or in a liquid nitrogen transport dewar.

Media and any other reagents may be shipped in the same box as your cells if the temperature conditions are compatible. Please do not completely fill any liquid vessels as this tends to lead to leaking. We recommend placing each vessel inside of a separate plastic zip-closure bag lined with paper towels prior to wrapping it securely with bubble wrap.

Our preferred mode of shipment is via FedEx Priority Overnight. Always check with your shipping partner to ensure your items are delivered safely to us and with all transport regulations in mind.

AGL’s cell culture team can receive live cell shipments on Tuesdays, Wednesdays, and Thursdays, barring holidays or other closures. Please notify us at agl@appliedgenetics.com at least 48 hours prior to shipping your sample.

For cell line characterization studies AGL issues hard-copy reports with wet signatures, shipped via FedEx Standard Overnight service to the sponsor’s physical address as provided on the submission documents. Final reports are typically issued within 4-6 weeks of the date of sample receipt by AGL. Factors affecting turnaround time include cells’ behavior in culture and their response to standard chromosome harvest techniques. If, for example, your cells grow slowly or do not produce metaphase spreads suitable for analysis, then turnaround times may be longer than initially anticipated. You may contact us agl@appliedgenetics.com at any time if you’d like to check on the status of your testing.

All sample submissions must be accompanied by a valid purchase order. Invoices are generated at the time that the final report is issued. AGL prefers to invoice via email using the billing email address provided on the Study Initiation Form; if another method of invoice delivery is required, please inform us at the time of sample submission. Payment terms are Net 30. We accept payment via check, ACH, and credit card. All billing inquiries should be sent to accountsreceivable@appliedgenetics.com

FAQs

How do I begin the process of ordering karyotype and/or FISH analysis for my cells?

Please contact us at agl@appliedgenetics.com at least 48 hours prior to your planned sample submission to confirm that we have space in our schedule to receive your cells. Whenever possible, please include the species and cell type of the sample that you plan to submit and its required growth conditions, especially if they differ from 37°C and 5% CO2 on a stationary platform.

What paperwork do I need to complete for my sample?

Please send us a completed Study  Initiation Form, a completed/signed Protocol and a valid purchase order for each sample that will be submitted. Please contact us at agl@appliedgenetics.com to obtain the Study Initiation Form and Protocol specific to your testing needs

What should I send with my cells?

Please send complete media and any other reagents (e.g., FBS, specific formulations of trypsin) required for culturing your cells. If your cells require specialty culture vessels and/or surface coatings, please provide these as well. [See here  for a list of standard cell culture supplies kept in stock at AGL for use with client cells.]

What cell culture supplies does AGL have available for use with my cells?

We keep the following cell culture consumables in stock at AGL for use with client cell samples:
  • T25 & T75 tissue culture flasks
  • 125 mL, 250 mL, & 500 mL flat-botom shaker flasks
  • TrypLETM Express
  • TrypLETM Select
  • DPBS
  • cell scrapers
Additional supplies are sometimes available; please inquire for details prior to sample submission. If you do not specify your preferences or send us your own supplies, we will select from AGL’s in-house supplies as needed while culturing your cells.

Should I send live or frozen cells?

While AGL accepts both live cell cultures and cryopreserved cells, we generally prefer to receive live cells. If for any reason you prefer or need to send cryopreserved cells (e.g., internal constraints or specific cell types that are too delicate for transport as live cultures) we’ll be happy to accommodate them.

How should I prepare my cells prior to shipment to AGL?

Cell cultures must be actively dividing in order for a successful chromosome harvest to be performed. Ideally, cultures will have been prepped so that they are likely to be in log phase approximately 24-48 hours after arrival at our lab (or after thawing, if submitted frozen). We request that you send multiple flasks seeded at different densities so that we have a few options to select from when attempting chromosome harvest and to serve as backups in case of damage to any of the flasks during transport. If sending cryopreserved cells please provide at least two vials, each containing a minimum of 1e6 viable cells.

How do I package my sample?

Actively dividing cultures should be shipped at room temperature, surrounded with room-temperature gel packs (or similar) to stabilize temperature during transport. We recommend placing each vessel inside of a separate plastic zip closure bag lined with paper towels prior to wrapping it securely with bubble wrap. Flasks of live cells should be filled with culture medium to the bottom of the neck of the flask (see example). This ensures that the cells remain covered during transport but allows for expansion of medium due to pressure changes during shipment and will minimize the risk of leaking. AGL will reduce the volume of media to a level appropriate for culture after unpacking the sample and allowing time for any cells in suspension to settle.

Cryopreserved cells must be shipped on dry ice or in a liquid nitrogen transport dewar.

Media and any other reagents may be shipped in the same box as your cells if the temperature conditions are compatible. Please do not completely fill bottles or tubes as this increases the risk of leaking. Allow a small amount of room for liquid expansion due to pressure changes during shipment. We recommend placing each item inside a separate plastic zip-closure bag lined with paper towels prior to wrapping securely with bubble wrap.

As always, check with your shipping partner to ensure your items are delivered safely to us and with all transport regulations in mind.

What happens to vessels that are damaged during shipment?

Any live culture vessels received with leaks, cracks, or other damage will be evaluated by our cell culture team and handled accordingly. Flasks with severe damage will be discarded. If no flasks arrive in suitable condition for culture, AGL will contact you to schedule a resubmission of your sample. The contents of compromised vessels that do not contain cells will be filter sterilized whenever possible.

Should I expect to receive progress reports?

AGL does not issue formal interim or progress reports. However, AGL may contact you during the course of your study regarding matters like paperwork questions or technical issues (e.g., poor performance of cells in culture, difficulty obtaining metaphase spreads, unusual complexities during analysis). You may contact us at any time if you’d like to check on the status of your testing.

How long will it take to get my final report?

Our typical turnaround time falls between 4-6 weeks from the date of sample receipt to issuance of the Final Report. The biggest factors affecting turnaround time are the cells’ behavior in culture and their response to standard chromosome harvest techniques. If, for example, your cells grow slowly or do not produce metaphase spreads suitable for analysis, then turnaround times may be longer than initially anticipated. You may contact us at agl@appliedgenetics.com at any time if you’d like to check on the status of your testing.

What information is included in the Final Report?

You can view a sample Title Page and Table of Contents here.

FAQs

How do I begin the process of ordering karyotype and/or FISH analysis for my cells?

Please contact us at agl@appliedgenetics.com to discuss your anticipated sample submission schedule and to ensure that our facility can accommodate your culture. (Please note: Only BSL-1 and BSL-2 handling is available.) We will need to know the type of cells that you plan to submit, their required culture conditions, and the timeframe in which you would like to send us your cells. The sooner we have this information, the smoother the submission process will be.

Should I expect to receive progress reports?

No, unless there is an issue with your sample (e.g., paperwork questions, poor performance of cells in culture, difficulty obtaining metaphase spreads, unusual complexities during analysis) AGL will not initiate contact with you during the testing process. We are, however, happy to provide study updates upon request at any time. All status inquiries should be directed to agl@appliedgenetics.com.

What information is included in the Final Report?

You can view a sample Title Page and Table of Contents here.

If you would like to view a full sample report, please request one here.

What should I send with my cells?

Please send complete media and any other reagents (e.g., FBS, ReleSR, specific formulations of trypsin) required for culturing your cells. If your cells require specialty culture vessels and/or surface coatings, please provide these as well. [See here  for a list of standard cell culture supplies kept in house at AGL for use with client samples.]

What cell culture supplies does AGL have available for use with my cells?

We keep the following cell culture consumables in stock at AGL for use with client cell samples:

  • T25 & T75 tissue culture flasks
  • 125 mL, 250 mL, & 500 mL flat-botom shaker flasks
  • TrypLE Express
  • TrypLE Select
  • DPBS
  • cell scrapers

Additional supplies are sometimes available; please inquire for details prior to sample submission. If you do not specify your preferences or send us your own supplies, we will select from AGL’s in-house supplies as needed while culturing your cells.

Should I send live or frozen cells?

While AGL accepts both live cell cultures and cryopreserved cells, we generally prefer to receive live cells as this usually allows for a faster turnaround time and less manipulation of your sample by AGL. If for any reason you prefer or need to send cryopreserved cells (e.g., internal constraints or specific cell types that are too delicate for transport as live cultures) we’ll be happy to accommodate them.

What paperwork do I need to complete for my sample?

We’ll need a completed Study Initiation Form, a completed/signed Protocol document and a valid purchase order for each sample that will be submitted. Please contact us at agl@appliedgenetics.com to obtain the Protocol document specific to your testing needs.

How should I prepare my cells prior to shipment to AGL?

AGL needs actively dividing cells in order to obtain a successful chromosome harvest. Ideally, cultures will have been prepped so that they are likely to be in log phase approximately 24-48 hours after arrival at our lab (or after thawing, if submitted frozen). We request that you set up multiple flasks seeded at different densities so that we have a few options to select from when atempting chromosome harvest and to serve as backups in case of damage to any of the flasks during transport. If sending cryopreserved cells please provide at least two vials, each containing a minimum of 1e6 viable cells.

How do I package my sample?

Live cells should be shipped at room temperature, surrounded with room-temperature gel packs (or similar) to stabilize temperature during transport. We recommend placing each vessel inside of a separate plastic zip-closure bag lined with paper towels prior to wrapping it securely with bubble wrap. Flasks of live cells should be filled with medium up to the bottom of the neck of the flask (see example) so that the cells remain covered during transport but the flasks are not so full that they are prone to leaking. AGL will reduce the volume of media to the amount appropriate for culture after unpacking the sample and allowing time for any cells in suspension to setle.

Cryopreserved cells must be shipped on dry ice or in a liquid nitrogen transport dewar.

Media and any other reagents may be shipped in the same box as your cells if the temperature conditions are compatible. Please do not completely fill any liquid vessels as this tends to lead to leaking. We recommend placing each vessel inside of a separate plastic zip-closure bag lined with paper towels prior to wrapping it securely with bubble wrap.

As always, check with your shipping partner to ensure your items are delivered safely to us and with all transport regulations in mind.

What happens to vessels that are damaged during shipment?

Any live culture vessels received with leaks, cracks, or other damage will be evaluated by our cell culture team and handled accordingly. Flasks with severe damage will be discarded. If no flasks arrive in suitable condition for culture, AGL will contact you to schedule a resubmission of your sample. The contents of compromised vessels that do not contain cells will be sterile filtered whenever possible.

How long will it take to get my final report?

Our typical turnaround time falls between 4-6 weeks from the date of sample receipt to issuance of the Final Report. The biggest factors affecting turnaround time are the cells’ behavior in culture and their response to standard chromosome harvest techniques. If, for example, your cells grow slowly or do not produce metaphase spreads suitable for analysis, then turnaround times may be longer than initially anticipated. You may contact us at agl@appliedgenetics.com at any time if you’d like to check on the status of your testing.

Still have questions?

Our team is ready to support you. Contact us so we can learn more about your needs.

Ready to Get Started

We are looking forward to supporting you. Please click on “Get Quote” to get started.